Class: TraitValue
classDiagram
class TraitValue
click TraitValue href "../TraitValue/"
TraitValue : body_mass
TraitValue : body_mass_ambiguous
TraitValue : body_mass_units_inferred
TraitValue : catalogNumber
TraitValue : countryCode
TraitValue : day
TraitValue : decimalLatitude
TraitValue : decimalLongitude
TraitValue : dynamicProperties
TraitValue : ear_from_notch
TraitValue : ear_length
TraitValue : ear_length_units_inferred
TraitValue : embryo_count
TraitValue : embryo_length
TraitValue : embryo_size_units_inferred
TraitValue : family
TraitValue : fieldNotes
TraitValue : forearm_length
TraitValue : genus
TraitValue : hind_foot_length
TraitValue : hind_foot_length_units_inferred
TraitValue : hind_foot_with_claw
TraitValue : institutionCode
TraitValue : lactation
TraitValue : life_stage
TraitValue : month
TraitValue : nipple
TraitValue : nipple_count
TraitValue : occurrenceID
TraitValue : occurrenceRemarks
TraitValue : order
TraitValue : pregnancy
TraitValue : scientificName
TraitValue : sex
TraitValue : specificEpithet
TraitValue : stateProvince
TraitValue : tail_length
TraitValue : tail_length_estimated
TraitValue : tail_length_units_inferred
TraitValue : testicle_description
TraitValue : testicle_length
TraitValue : testicle_size_units_inferred
TraitValue : testicle_width
TraitValue : total_length
TraitValue : total_length_ambiguous
TraitValue : total_length_estimated
TraitValue : total_length_units_inferred
TraitValue : tragus_length
TraitValue : vagina
TraitValue : year
Slots
Name | Cardinality and Range | Description | Inheritance |
---|---|---|---|
occurrenceID | 0..1 String |
Identifies the record that contains the trait data values | direct |
institutionCode | 0..1 String |
direct | |
catalogNumber | 0..1 String |
direct | |
scientificName | 0..1 String |
direct | |
order | 0..1 String |
direct | |
family | 0..1 String |
direct | |
genus | 0..1 String |
direct | |
specificEpithet | 0..1 String |
direct | |
day | 0..1 Integer |
The day of the month that the trait was recorded | direct |
month | 0..1 Integer |
The month that the trait was recorded | direct |
year | 0..1 Integer |
The year that the trait was recorded | direct |
countryCode | 0..1 String |
The country where the specimen with the trait was found | direct |
stateProvince | 0..1 String |
The state where the specimen with the trait was found | direct |
decimalLatitude | 0..1 Float |
The latitude where the specimen with the trait was found | direct |
decimalLongitude | 0..1 Float |
The longitude where the specimen with the trait was found | direct |
dynamicProperties | 0..1 String |
direct | |
occurrenceRemarks | 0..1 String |
direct | |
fieldNotes | 0..1 String |
direct | |
body_mass | 0..1 Float |
The mass of specimen having the trait | direct |
body_mass_ambiguous | 0..1 Boolean |
Specifies if the recorded body mass is ambiguous | direct |
body_mass_units_inferred | 0..1 Boolean |
Specifies if the body mass units were inferred | direct |
ear_from_notch | 0..1 Float |
Length of the ear from the notch to the tip | direct |
ear_length | 0..1 Float |
The length of an external ear | direct |
ear_length_units_inferred | 0..1 Boolean |
Specifies if the ear length units were inferred | direct |
embryo_count | 0..1 Integer |
The number of embryos observed in uterus | direct |
embryo_length | 0..1 Float |
The length of an embryo | direct |
embryo_size_units_inferred | 0..1 Boolean |
Specifies if the embryo size units were inferred | direct |
forearm_length | 0..1 Float |
The length of a forearm | direct |
hind_foot_length | 0..1 Float |
The lengh of a hindfoot | direct |
hind_foot_length_units_inferred | 0..1 Boolean |
Specifies if the hind foot length units were inferred | direct |
hind_foot_with_claw | 0..1 Float |
A length measurement of a hindfoot that includes the nail | direct |
lactation | 0..1 String |
Secretion or expression of milk from the mammary glands | direct |
life_stage | 0..1 String |
The age class or life stage of the dwc:Organism(s) at the time the dwc:Occurr... | direct |
nipple | 0..1 String |
The morphology of the specimen's nipple(s) | direct |
nipple_count | 0..1 Integer |
The number of nipples the specimen has | direct |
pregnancy | 0..1 String |
The specimen's uterus contains a developing embryo, fetus, or unborn offsprin... | direct |
sex | 0..1 String |
The biological sex of the specimen | direct |
tail_length | 0..1 Float |
The length of the specimen's tail | direct |
tail_length_estimated | 0..1 Boolean |
Specifies if the tail length was estimated | direct |
tail_length_units_inferred | 0..1 Boolean |
Specifies if the tail length units were inferred | direct |
testicle_description | 0..1 String |
The morphology of a testis | direct |
testicle_length | 0..1 Float |
The length of the long axis of testis spheroid | direct |
testicle_size_units_inferred | 0..1 Boolean |
Specifies if the testis size units were inferred | direct |
testicle_width | 0..1 Float |
The length of the short axis of testis spheroid (perpendicular to long axis a... | direct |
total_length | 0..1 Float |
Total length of the specimen | direct |
total_length_ambiguous | 0..1 Boolean |
Specifies if the total length recorded is ambiguous | direct |
total_length_estimated | 0..1 Boolean |
Specifies if the total length was estimated | direct |
total_length_units_inferred | 0..1 Boolean |
Specifies if the total length units were inferred | direct |
tragus_length | 0..1 Float |
The length of the specimen's tragus | direct |
vagina | 0..1 String |
The degree of perforation of the female vagina | direct |
Identifier and Mapping Information
Schema Source
- from schema: https://w3id.org/FOVT/linkml/traitvalue
Mappings
Mapping Type | Mapped Value |
---|---|
self | traitvalue:TraitValue |
native | traitvalue:TraitValue |
LinkML Source
Direct
name: TraitValue
from_schema: https://w3id.org/FOVT/linkml/traitvalue
slots:
- occurrenceID
- institutionCode
- catalogNumber
- scientificName
- order
- family
- genus
- specificEpithet
- day
- month
- year
- countryCode
- stateProvince
- decimalLatitude
- decimalLongitude
- dynamicProperties
- occurrenceRemarks
- fieldNotes
- body_mass
- body_mass_ambiguous
- body_mass_units_inferred
- ear_from_notch
- ear_length
- ear_length_units_inferred
- embryo_count
- embryo_length
- embryo_size_units_inferred
- forearm_length
- hind_foot_length
- hind_foot_length_units_inferred
- hind_foot_with_claw
- lactation
- life_stage
- nipple
- nipple_count
- pregnancy
- sex
- tail_length
- tail_length_estimated
- tail_length_units_inferred
- testicle_description
- testicle_length
- testicle_size_units_inferred
- testicle_width
- total_length
- total_length_ambiguous
- total_length_estimated
- total_length_units_inferred
- tragus_length
- vagina
Induced
name: TraitValue
from_schema: https://w3id.org/FOVT/linkml/traitvalue
attributes:
occurrenceID:
name: occurrenceID
description: Identifies the record that contains the trait data values.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: occurrenceID
owner: TraitValue
domain_of:
- TraitValue
range: string
institutionCode:
name: institutionCode
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: institutionCode
owner: TraitValue
domain_of:
- TraitValue
range: string
catalogNumber:
name: catalogNumber
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: catalogNumber
owner: TraitValue
domain_of:
- TraitValue
range: string
scientificName:
name: scientificName
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: scientificName
owner: TraitValue
domain_of:
- TraitValue
range: string
order:
name: order
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: order
owner: TraitValue
domain_of:
- TraitValue
range: string
family:
name: family
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: family
owner: TraitValue
domain_of:
- TraitValue
range: string
genus:
name: genus
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: genus
owner: TraitValue
domain_of:
- TraitValue
range: string
specificEpithet:
name: specificEpithet
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: specificEpithet
owner: TraitValue
domain_of:
- TraitValue
range: string
day:
name: day
description: The day of the month that the trait was recorded.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: day
owner: TraitValue
domain_of:
- TraitValue
range: integer
month:
name: month
description: The month that the trait was recorded.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: month
owner: TraitValue
domain_of:
- TraitValue
range: integer
year:
name: year
description: The year that the trait was recorded.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: year
owner: TraitValue
domain_of:
- TraitValue
range: integer
countryCode:
name: countryCode
description: The country where the specimen with the trait was found.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: countryCode
owner: TraitValue
domain_of:
- TraitValue
range: string
stateProvince:
name: stateProvince
description: The state where the specimen with the trait was found.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: stateProvince
owner: TraitValue
domain_of:
- TraitValue
range: string
decimalLatitude:
name: decimalLatitude
description: The latitude where the specimen with the trait was found.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: decimalLatitude
owner: TraitValue
domain_of:
- TraitValue
range: float
decimalLongitude:
name: decimalLongitude
description: The longitude where the specimen with the trait was found.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: decimalLongitude
owner: TraitValue
domain_of:
- TraitValue
range: float
dynamicProperties:
name: dynamicProperties
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: dynamicProperties
owner: TraitValue
domain_of:
- TraitValue
range: string
occurrenceRemarks:
name: occurrenceRemarks
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: occurrenceRemarks
owner: TraitValue
domain_of:
- TraitValue
range: string
fieldNotes:
name: fieldNotes
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: fieldNotes
owner: TraitValue
domain_of:
- TraitValue
range: string
body_mass:
name: body_mass
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf OBA:VT0001259
description: The mass of specimen having the trait.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:VT0001259
rank: 1000
alias: body_mass
owner: TraitValue
domain_of:
- TraitValue
range: float
body_mass_ambiguous:
name: body_mass_ambiguous
description: Specifies if the recorded body mass is ambiguous.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: body_mass_ambiguous
owner: TraitValue
domain_of:
- TraitValue
range: boolean
body_mass_units_inferred:
name: body_mass_units_inferred
description: 'Specifies if the body mass units were inferred. '
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: body_mass_units_inferred
owner: TraitValue
domain_of:
- TraitValue
range: boolean
ear_from_notch:
name: ear_from_notch
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf FOVT:0000005
description: Length of the ear from the notch to the tip.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: ear_from_notch
owner: TraitValue
domain_of:
- TraitValue
range: float
ear_length:
name: ear_length
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf OBA:0003426
description: The length of an external ear.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:0003426
rank: 1000
alias: ear_length
owner: TraitValue
domain_of:
- TraitValue
range: float
ear_length_units_inferred:
name: ear_length_units_inferred
description: 'Specifies if the ear length units were inferred. '
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: ear_length_units_inferred
owner: TraitValue
domain_of:
- TraitValue
range: boolean
embryo_count:
name: embryo_count
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf UBERON:0000995
description: The number of embryos observed in uterus.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- UBERON:0000995
- UBERON:0009098
rank: 1000
alias: embryo_count
owner: TraitValue
domain_of:
- TraitValue
range: integer
embryo_length:
name: embryo_length
description: The length of an embryo.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: embryo_length
owner: TraitValue
domain_of:
- TraitValue
range: float
embryo_size_units_inferred:
name: embryo_size_units_inferred
description: 'Specifies if the embryo size units were inferred. '
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: embryo_size_units_inferred
owner: TraitValue
domain_of:
- TraitValue
range: boolean
forearm_length:
name: forearm_length
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf FOVT:0001379
description: The length of a forearm.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- FOVT:0001379
rank: 1000
alias: forearm_length
owner: TraitValue
domain_of:
- TraitValue
range: float
hind_foot_length:
name: hind_foot_length
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf OBA:1000049
description: The lengh of a hindfoot.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:1000049
rank: 1000
alias: hind_foot_length
owner: TraitValue
domain_of:
- TraitValue
range: float
hind_foot_length_units_inferred:
name: hind_foot_length_units_inferred
description: 'Specifies if the hind foot length units were inferred. '
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: hind_foot_length_units_inferred
owner: TraitValue
domain_of:
- TraitValue
range: boolean
hind_foot_with_claw:
name: hind_foot_with_claw
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf FOVT:0000003
description: A length measurement of a hindfoot that includes the nail.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- FOVT:0000003
rank: 1000
alias: hind_foot_with_claw
owner: TraitValue
domain_of:
- TraitValue
range: float
lactation:
name: lactation
description: Secretion or expression of milk from the mammary glands.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- UBERON:0001911
rank: 1000
alias: lactation
owner: TraitValue
domain_of:
- TraitValue
range: string
life_stage:
name: life_stage
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf UBERON:0000105
description: The age class or life stage of the dwc:Organism(s) at the time the
dwc:Occurrence was recorded.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- dwc:lifeStage
- UBERON:0000105
rank: 1000
alias: life_stage
owner: TraitValue
domain_of:
- TraitValue
range: string
nipple:
name: nipple
description: The morphology of the specimen's nipple(s).
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:VT0006078
rank: 1000
alias: nipple
owner: TraitValue
domain_of:
- TraitValue
range: string
nipple_count:
name: nipple_count
description: The number of nipples the specimen has.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:VT1000206
rank: 1000
alias: nipple_count
owner: TraitValue
domain_of:
- TraitValue
range: integer
pregnancy:
name: pregnancy
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf UBERON:0000995
description: The specimen's uterus contains a developing embryo, fetus, or unborn
offspring.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- UBERON:0000995
- GO:0007565
rank: 1000
alias: pregnancy
owner: TraitValue
domain_of:
- TraitValue
range: string
sex:
name: sex
description: The biological sex of the specimen.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- PATO:0000047
rank: 1000
alias: sex
owner: TraitValue
domain_of:
- TraitValue
range: string
tail_length:
name: tail_length
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf OBA:VT0002758
description: The length of the specimen's tail.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:VT0002758
rank: 1000
alias: tail_length
owner: TraitValue
domain_of:
- TraitValue
range: float
tail_length_estimated:
name: tail_length_estimated
description: Specifies if the tail length was estimated.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: tail_length_estimated
owner: TraitValue
domain_of:
- TraitValue
range: boolean
tail_length_units_inferred:
name: tail_length_units_inferred
description: 'Specifies if the tail length units were inferred. '
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: tail_length_units_inferred
owner: TraitValue
domain_of:
- TraitValue
range: boolean
testicle_description:
name: testicle_description
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf OBA:VT0001146
description: The morphology of a testis.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:VT0001146
rank: 1000
alias: testicle_description
owner: TraitValue
domain_of:
- TraitValue
range: string
testicle_length:
name: testicle_length
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf FOVT:0001057
description: The length of the long axis of testis spheroid.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- FOVT:0001057
rank: 1000
alias: testicle_length
owner: TraitValue
domain_of:
- TraitValue
range: float
testicle_size_units_inferred:
name: testicle_size_units_inferred
description: 'Specifies if the testis size units were inferred. '
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: testicle_size_units_inferred
owner: TraitValue
domain_of:
- TraitValue
range: boolean
testicle_width:
name: testicle_width
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf FOVT:0001368
description: The length of the short axis of testis spheroid (perpendicular to
long axis at midpoint).
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- FOVT:0001368
rank: 1000
alias: testicle_width
owner: TraitValue
domain_of:
- TraitValue
range: float
total_length:
name: total_length
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf OBA:VT0001256
description: Total length of the specimen. Fish:Total length (TL) is the length
of a fish measured from the tip of the snout to tip of the longest lobe of caudal
fin. Measurement done with caudal fin lobes compressed and measured at midline.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:VT0001256
rank: 1000
alias: total_length
owner: TraitValue
domain_of:
- TraitValue
range: float
total_length_ambiguous:
name: total_length_ambiguous
description: Specifies if the total length recorded is ambiguous.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: total_length_ambiguous
owner: TraitValue
domain_of:
- TraitValue
range: boolean
total_length_estimated:
name: total_length_estimated
description: Specifies if the total length was estimated.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: total_length_estimated
owner: TraitValue
domain_of:
- TraitValue
range: boolean
total_length_units_inferred:
name: total_length_units_inferred
description: 'Specifies if the total length units were inferred. '
from_schema: https://w3id.org/FOVT/linkml/traitvalue
rank: 1000
alias: total_length_units_inferred
owner: TraitValue
domain_of:
- TraitValue
range: boolean
tragus_length:
name: tragus_length
annotations:
pun_as:
tag: pun_as
value: rdf:type owl:Class; rdfs:subClassOf UBERON:0010887
description: The length of the specimen's tragus.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- UBERON:0010887
rank: 1000
alias: tragus_length
owner: TraitValue
domain_of:
- TraitValue
range: float
vagina:
name: vagina
description: The degree of perforation of the female vagina.
from_schema: https://w3id.org/FOVT/linkml/traitvalue
related_mappings:
- OBA:VT0001139
rank: 1000
alias: vagina
owner: TraitValue
domain_of:
- TraitValue
range: string